Quantile Normalization (QN)

Quantile Normalization (QN) for miRNA-Seq data.

Usage

norm.QN(raw, filter = FALSE)

Arguments

raw

Raw read count matrix (rows = genes, cols = samples).

groups

Sample groups (subtypes)

Value

A list with the following elements:

dataNormalized

Normalized read counts.

Examples

rawCounts <- matrix(0:20, nrow = 7)
normCounts <- norm.QN(rawCounts)