Estimated handling effects

Estimate handling effects of an array of the nonuniformly-handled dataset by taking the difference between its data and the data of its matched array in the uniformly-handled dataset.

Usage

estimate.handling.effect(uhdata, nuhdata)

Arguments

uhdata

the uniformly-handled dataset. The dataset must have rows as probes and columns as samples.

nuhdata

the nonuniformly-handled dataset. The dataset must have rows as probes and columns as samples and the same dimensions and the same probe names as the uniformly-handled dataset.

Value

an estimation of the handling effects

Examples

handling.effect <- estimate.handling.effect(uhdata = uhdata.pl, nuhdata = nuhdata.pl)